Tag: fish swimming

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Illuminance-tuned collective motion in fish

B. Lafoux, J. Moscatelli, R. Godoy-Diana & B. Thiria
Communications Biology 6, Article number: 585 (2023)
doi: 10.1038/s42003-023-04861-8

We experimentally investigate the role of illumination on the collective dynamics of a large school (ca. 50 individuals) of Hemigrammus rhodostomus.

Experimental setup: shallow swimming arena with illuminance control and infrared video recording

The structure of the group, defined using two order parameters (milling annd polarization), is quantified while progressively altering the visual range of the fish through controlled cycles of ambient light intensity. We show that, at low light levels, the individuals within the group are unable to form a cohesive group…

while at higher illuminance the degree of alignment of the school correlates with the light intensity. When increasing the illuminance, the school structure is successively characterized by a polarized state…

followed by a highly regular and stable rotational configuration (milling).

Our study shows that vision is necessary to achieve cohesive collective motion for free swimming fish schools, while the short-range lateral line sensing is insufficient in this situation. The present experiment therefore provides new insights into the interaction mechanisms that govern the emergence and intensity of collective motion in biological systems. Watch a full experiment here:

Full paper here:
Lafoux, B., Moscatelli, J., Godoy-Diana, R., Thiria, B. Illuminance-tuned collective motion in fish. Commun Biol 6, 585 (2023).
https://doi.org/10.1038/s42003-023-04861-8

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Special issue: Bioinspired fluid-structure interaction

https://iopscience.iop.org/journal/1748-3190/page/Bioinspired-Fluid-Structure-Interaction

Fluid-structure interaction (FSI) studies the interaction between fluid and solid objects. It helps understand how fluid motion affects solid objects and vice versa. FSI research is important in engineering applications such as aerodynamics, hydrodynamics, and structural analysis. It has been used to design efficient systems such as ships, aircraft, and buildings. FSI in biological systems has gained interest in recent years for understanding how organisms interact with their fluidic environment. Our special issue features papers on various biological and bio-inspired FSI problems.

S. Jung & R. Godoy-Diana
Bioinspiration & biomimetics 18, 030401 (2023)
Editorial article: 10.1088/1748-3190/acc778

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Intermittent vs. continuous swimming: An optimization tale

G. Li, D. Kolomenskiy, H. Liu, R. Godoy-Diana & B. Thiria
Physical Review Fluids 8, 013101 (2023)
doi: 10.1103/PhysRevFluids.8.013101
see also in Physics Magazine: Why Fish Swim Intermittently

Intermittent swimming, also termed “burst-and-coast swimming,” has been reported as a strategy for fish to enhance their energetical efficiency. Intermittent swimming involves additional control parameters, which complexifies its understanding by means of quantitative and parametrical analysis, in comparison with continuous swimming. In this study, we used a hybrid computational fluid dynamic (CFD) model to assess the swimming performance in intermittent swimming parametrically and quantitatively. A Navier-Stokes solver is applied to construct a database in the multidimensional space of the control parameters to connect the undulation kinematics to swimming performance. Based on the database, an indirect numerical approach named “gait assembly” is used to generate arbitrary burst-and-coast gaits to explore the parameter space. Our simulations directly measured the hydrodynamics and energetics under the unsteady added-mass effect during burst-and-coast swimming. The results suggest that the instantaneous power of burst is basically determined by undulatory kinematics. The results show that the energetical performance of burst-and-coast swimming can be better than that of continuous swimming, but also that an unoptimized burst-and-coast gait may become very energetically expensive. These results shed light on the mechanisms at play in intermittent swimming, enabling us to better understand fish behavior and to propose design guidelines for fishlike robots.

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How lateral-line sensing can enable swimming fish to judge their relative position and kinematic synchronization with a neighbor

Flow field computed around a pair of swimming fish. The pressure and shear-stress signals along the sides of the protagonist fish are monitored while changing the relative position and tail-beat phase lag of the companion fish.

For fish, swimming in group may be favorable to individuals. Several works reported that in a fish school, individuals sense and adjust their relative position to prevent collisions and maintain the group formation. Also, from a hydrodynamic perspective, relative-position and kinematic synchronisation between adjacent fish may considerably influence their swimming performance. Fish may sense the relative-position and tail-beat phase difference with their neighbors using both vision and the lateral-line system, however, when swimming in dark or turbid environments, visual information may become unavailable. To understand how lateral-line sensing can enable fish to judge the relative-position and phase-difference with their neighbors, in this study, based on a verified three-dimensional computational fluid dynamics approach, we simulated two fish swimming adjacently with various configurations. The lateral-line signal was obtained by sampling the surface hydrodynamic stress. The sensed signal was processed by Fast Fourier Transform (FFT), which is robust to turbulence and environmental flow. By examining the lateral-line pressure and shear-stress signals in the frequency domain, various states of the neighboring fish were parametrically identified. Our results reveal that the FFT-processed lateral-line signals in one fish may potentially reflect the relative-position, phase-differences, and the tail-beat frequency of its neighbor. Our results shed light on the fluid dynamical aspects of the lateral-line sensing mechanism used by fish. Furthermore, the presented approach based on FFT is especially suitable for applications in bioinspired swimming robotics. We provide suggestions for the design of artificial systems consisting of multiple stress sensors for robotic fish to improve their performance in collective operation.

Hydrodynamical Fingerprint of a Neighbour in a Fish Lateral Line
G. Li, D. Kolomenskiy, H. Liu, B. Thiria & R. Godoy-Diana Frontiers in Robotics and AI: Bio-Inspired Robotics section 9, 825889 (2022)
doi: 10.3389/frobt.2022.825889

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Experiments & numerical modelling of burst-and-coast fish swimming

Body and caudal fin undulations are a widespread locomotion strategy in fish, and their swimming kinematics is usually described by a characteristic frequency and amplitude of the tail-beat oscillation. In some cases, fish use intermittent gaits, where a single frequency is not enough to fully describe their kinematics. Energy efficiency arguments have been invoked in the literature to explain this so-called burst-and-coast regime but well controlled experimental data are scarce. Here we report on an experiment with burst-and-coast swimmers and a numerical model based on the observations to show that: (1) fish modulate a unique intrinsic cycle to sustain the demanded speed by modifying the bursting to coasting ratio while maintaining the duration of the cycle nearly constant; and (2) the chosen kinematics correspond to energy-saving gaits over the range of swimming speeds tested.

Burst-and-coast swimmers optimize gait by adapting unique intrinsic cycle
G. Li, I. Ashraf, B. François, D. Kolomenskiy, F. Lechenault, R. Godoy-Diana & B. Thiria
Communications Biology 4, 40 (2021)
[doi:10.1038/s42003-020-01521-z]
preprint: arXiv:2002.09176
Behind the paper blog post: https://ecoevocommunity.nature.com/posts/on-the-intermittent-tail-beat-kinematics-in-steady-swimming-fish


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On the energetics and stability of a minimal fish school

On the energetics and stability of a minimal fish school
G. Li, D. Kolomenskiy, H. Liu, B. Thiria & R. Godoy-Diana
PLoS ONE 14(8): e0215265 (2019)
https://doi.org/10.1371/journal.pone.0215265

See also:
On the interference of vorticity and pressure fields of a minimal fish school
G. Li, D. Kolomenskiy, H. Liu, B. Thiria & R. Godoy-Diana
Journal of Aero Aqua Bio-mechanisms 8 (1), 27-33 (2019)
[doi:10.5226/jabmech.8.27]

The physical basis for fish schooling is examined using three-dimensional numerical simulations of a pair of swimming fish, with kinematics and geometry obtained from experimental data. Energy expenditure and efficiency are evaluated using a cost of transport function, while the effect of schooling on the stability of each swimmer is examined by probing the lateral force and the lateral and longitudinal force fluctuations. We construct full maps of the aforementioned quantities as functions of the spatial pattern of the swimming fish pair and show that both energy expenditure and stability can be invoked as possible reasons for the swimming patterns and tail-beat synchronization observed in real fish. Our results suggest that high cost of transport zones should be avoided by the fish. Wake capture may be energetically unfavorable in the absence of kinematic adjustment. We hereby hypothesize that fish may restrain from wake capturing and, instead, adopt side-to-side configuration as a conservative strategy, when the conditions of wake energy harvesting are not satisfied. To maintain a stable school configuration, compromise between propulsive efficiency and stability, as well as between school members, ought to be considered.

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Intesaaf Ashraf’s PhD defense. Interactions in Collective Fish Swimming

PhD defense on April 4th, 2018, 3pm, at the new PMMH meeting room (Sorbonne Université, Barre Cassan, Bât. A 1er Étage, 7 Quai Saint Bernard, 75005 Paris).

Interactions in Collective Fish Swimming

The question of how individuals in a population organise when living in groups arises for systems as different as a swarm of microorganisms or a flock of seagulls; and the different patterns for moving collectively involve a complex interaction of a wide spectrum of reasons, such as evading predators, optimising food prospection or diminishing energy consumption. The basic ingredient in such problems is the communication mechanism between individuals, that is to say, the way in which two neighbours sense each other, constituting the fabric of social behaviour. In this work we studied the case of fish schooling using a popular aquarium fish, the red nose tetra fish Hemigrammus bleheri. These fish are known to swim in highly cohesive groups and to sense each other both visually and through the lateral line, a system of organs based on the ability of hair cells to detect movement in their environment. In our experiments Continue reading “Intesaaf Ashraf’s PhD defense. Interactions in Collective Fish Swimming”