Google Scholar listing.

* joint authorship

Darwinian properties and their trade-offs in autocatalytic RNA networks.

S Ameta, S Arsène, S Foulon, B Saudemont, BE Clifton, AD Griffiths, P Nghe
Nature Communications (2021)

Thresholds in origin of life scenarios.

C Jeancolas, C Malaterre, P Nghe
iScience (2020)

Universal motifs and the diversity of autocatalytic systems.

A Blokhuis, D Lacoste, P Nghe
PNAS (2020)

Predicting Evolutionary Constraints by Identifying Conflicting Demands in Regulatory Networks.

M Kogenaru*, P Nghe*, FJ Poelwijk*, SJ Tans
Cell Systems (2020)

Flux, toxicity, and expression costs generate complex genetic interactions in a metabolic pathway.

Harry E Kemble, Catherine Eisenhauer, Alejandro Couce, Audrey Chapron, Mélanie Magnan, Gregory Gautier, Hervé Le Nagard, Philippe Nghe*, Olivier Tenaillon*
Science Advances (2020)

Predicting Evolution Using Regulatory Architecture.

Philippe Nghe, Marjon GJ de Vos, Enzo Kingma, Manjunatha Kogenaru, Frank J Poelwijk, Liedewij Laan, Sander J Tans
Annual Review of Biophysics (2020)

Metabolic Cost of Rapid Adaptation of Single Yeast Cells Under Unforeseen Challenge

Gabrielle Woronoff*, Philippe Nghe*, Jean Baudry, Laurent Boitard, Erez Braun, Andrew D. Griffiths, Jérôme Bibette
PNAS (2020)

The generality of transient compartmentalization and its associated error thresholds

Alexandre Blokhuis, Philippe Nghe, Luca Peliti, David Lacoste
Journal of Theoretical Biology (2020)

Mineral surfaces select for longer RNA molecules

Ryo Mizuuchi, Alex Blokhuis, Lena Vincent, Philippe Nghe, Niles Lehman, David Baum
Chemical Communications (2019)

Recent insights into the genotype‐phenotype relationship from massively‐parallel genetic assays

Harry Kemble, Philippe Nghe, Olivier Tenaillon
Evolutionary Applications (2019)

Large scale control and programming of gene expression using CRISPR.

Matthew Deyell, Sandeep Ameta, Philippe Nghe
Seminars in cell and developmental biology (2019)

Coupled catabolism and anabolism in autocatalytic RNA sets.

*Simon Arsène, *Sandeep Ameta, Niles Lehman, Andrew Griffiths, Philippe Nghe
Nucleic Acid Research 46 (18) 9660 (2018)

A graph-based algorithm for the multi-objective optimization of gene regulatory networks.

Philippe Nghe, Belà Mulder, Sander Tans
European Journal of Operational Research (2018)

Sign epistasis caused by hierarchy within signalling cascades.
Philippe Nghe, Manjunatha Kogenaru, Sander Tans
Nature Communications 9 (1), 1451 (2018)

Selection dynamics in transient compartmentalization.
Alex Blokhuis, David Lacoste, Philippe Nghe, Luca Peliti,
Physical Review Letters (2018)

Stochasticity in cellular metabolism and growth: approaches and consequences.
Martijn Wehrens, Ferhat Buke, Philippe Nghe, Sander Tans
Current Opinion in Systems Biology (2018)

Information-theoretic analysis of the directional influence between cellular processes.
Sourabh Lahiri, Philippe Nghe, Sander Tans, Martin Luc Rosinberg, David Lacoste
Plos One (2017)

Topological and thermodynamic factors that influence the evolution of small networks of catalytic RNA species.
Jessica Yeates, Philippe Nghe, Niles Lehman
RNA (2017)

Transient compartmentalization of RNA replicators prevents extinction due to parasites.
Shigeyoshi Matsumura, Ádám Kun, Michael Ryckelynck, Faith Coldren, András Szilágyi, Fabrice Jossinet, Christian Rick, Philippe Nghe, Eörs Szathmáry, Andrew D Griffiths
Science (2016)

Generation and filtering of gene expression noise by the bacterial cell cycle.
Noreen Walker, Philippe Nghe, Sander J. Tans
BMC Biology (2016)

Individuality and universality in the growth-division laws of single E. coli cells
Andrew S. Kennard, Matteo Osella, Avelino Javer, Jacopo Grilli, Philippe Nghe, Sander J. Tans, Pietro Cicuta, and Marco Cosentino Lagomarsino
Physical Review E (2016)

Prebiotic network evolution: six key parameters
Philippe Nghe, Wim Hordijk, Stuart A Kauffman, Sara I Walker, Francis J Schmidt, Harry Kemble, Jessica AM Yeates, Niles Lehman
Molecular Biosystems (2015)

Stochasticity of metabolism and growth at the single-cell level
Daniel J Kiviet*, Philippe Nghe*, Noreen Walker, Sarah Boulineau, Vanda Sunderlikova, Sander J Tans
Nature (2014)

Evolutionary constraints in variable environments, from proteins to networks
Katja M Taute*, Sebastian Gude*, Philippe Nghe*, Sander J Tans
Trends in Genetics (2014)

Microfabricated Polyacrylamide Devices for the Controlled Culture of Growing Cells and Developing Organisms
Philippe Nghe*, Sarah Boulineau*, Sebastian Gude, Pierre Recouvreux, Jeroen S van Zon, Sander J Tans
Plos One (2013)

Single-cell dynamics reveals sustained growth during diauxic shifts
Sarah Boulineau, Filipe Tostevin, Daniel J Kiviet, Pieter Rein ten Wolde, Philippe Nghe, Sander J Tans
Plos One (2013)

Soft Matter Physics (2008 – 2011)

Microfluidics and complex fluids
Philippe Nghe, Emmanuel Terriac, Marc Schneider, ZhenZhen Li, Michel Cloitre, Benjamin Abecassis, Patrick Tabeling
Lab On Chip (2011)

Flow-induced polymer degradation probed by a high throughput microfluidic set-up
Philippe Nghe, Patrick Tabeling, Armand Ajdari
Journal of Non-Newtonian Fluid Mechanics (2010)

Interfacially driven instability in the microchannel flow of a shear-banding fluid
Philippe Nghe, Suzanne M Fielding, Patrick Tabeling, Armand Ajdari
Physical Review Letters (2010)

High shear rheology of shear banding fluids in microchannels
Philippe Nghe, Guillaume Degré, Patrick Tabeling, Armand Ajdari
Applied Physics Letters (2008)

Microfluidic stickers
Denis Bartolo, Guillaume Degré, Philippe Nghe, Vincent Studer
Lab On Chip (2008)

Laboratory of BioChemistry ESPCI Paris-Tech